Whole genome sequencing of experimentally evolved streptomycin popula... - SRA

SRX26562680: Whole genome sequencing of experimentally evolved streptomycin population of Paracoccus denitrificans HAMBI_2443
1 ILLUMINA (Illumina MiSeq) run: 547,965 spots, 329.9M bases, 193.5Mb downloads

Design: Bacterial population DNA was extracted from overnight cultures (PPY media) using the DNeasy 96 Blood & Tissue Kit, DNA was enzymatically sheared and tagged with adapters using the Nextera Flex protocol with dual-indexed multiplexing, and paired 300-bp reads were generated on an Illumina MiSeq.

Submitted by: University of Turku

Study: Temporal changes in the role of species sorting and evolution determine community dynamics

PRJNA1179357 • SRP542150 • All experiments • All runs

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Raw 16S rRNA, population genome, and community genome sequencing data from a synthetic bacterial community of 23 bacterial species and the ciliate predator Tetrahymena thermophila. Data is used in the paper "Temporal changes in the role of species sorting and evolution determine community dynamics."

Sample:

SAMN44505225 • SRS23067992 • All experiments • All runs

Organism: Paracoccus denitrificans

Library:

Name: SH-WGS-050

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 547,965 spots, 329.9M bases, 193.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR31179947	547,965	329.9M	193.5Mb	2024-10-31

ID:: 35885985

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